Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015869240.1_cds_XP_016433693.1_29826
CDS Infomation

[gene=LOC107760192] [db_xref=GeneID:107760192] [protein=lysine-specific demethylase JMJ706-like] [protein_id=XP_016433693.1] [location=join(60389..60737,61103..61259,61336..61555,61980..62033,62126..62205,62284..62561,62743..63138,63276..63628,63739..64014,64590..64952)] [gbkey=CDS]
Sequence

ATGTCAAGGGAGGCTATGTTGGAGTTTTTGAAGCGAAAAAGGCTTCAACGAAAGAAACCA
GAATCTATGAATGATTCGACTTATGTCAGCAATACGATGAGTAGAAGTGGAGGAGATGCC
CTAAGCTCTTCAGCTTCATGTGGTGTTAGAGTTCATGTAAATGCAGGGTGGGGGACTTCC
TTAAACAGAAGAGATGTTTTCTCAAAGCACAAGGTTGCCAAGTTTGATACGTCTAATCTT
GACTGGACTGATAAAATTCCAGAATGTCCAGTTTATTATCCAAGTAAAGAGGAGTTTGAG
GATCCGCTGGTTTATCTCCAGAAGATAGCTCCTGAAGCTTCTAAATATGGAATATGCAAG
ATTGTTTCACCAATCATGGCTTCTGTTCCTGCTGGAGTAGTGTTGATGAAAGAGAAGGCT
GGTTTTAAATTTTCAACGAGGGTACAGCCACTTCGTCTAGCTGAATGGGATACAGATGAC
AAGGTCACATTTTTCATGAGCGGAAGAAACTACACATTTCGTGATTTCGAGAAAATGGCG
AACAAGCTCTTTACTCGTAGGTATTGTAGTGCTGGATGCCTTCCTCCTGCTTATATGGAA
AAAGAATTTTGGCATGAAATAGCTTGTGGAAAGACTGAGAGTGTTGAATATGCATGCGAT
GTTGATGGTAGTGCATTTTCATCTTCTCCCAATGATGAACTTGGAAAATGCAAATGGAAT
ATGAAGAGATTTTCTTGCCTACCTAAAGCAACACTTCGACTCCTCGAAAAAGCTATCCCG
GGAGTTACTGAACCAATGTTATACATTGGAATGCTATTTAGTATGTTTGCCTGGCATGTT
GAAGATCACTACTTGTACAGCATCAATTATCATCATTGCGGGGCAGCAAAAACCTGGTAT
GGTGTTCCAGGTCATGCAGCGCTCAACTTTGAAAAGGTTGTCCGCCAGCATGTCTATAAC
AATGATATCTTAAACGCTGATGGGGAGGATGGAGCTTTTGATGTGCTTTTGCAGAAGACA
ACATTGTTTCCTCCTAACATTTTATCAGAACATGATGTTCCTGTCTATAAAGCTGTTCAA
AAGCCTGGGGACTTTATAGTAACTTTTCCAAGAGCATATCATGCTGGATTTAGCCACGGT
TTTAACTGTGGCGAGGCTGTAAACTTTGCAACTGGTGATTGGTTCCCAATTGGTTCAGTT
GCTAGCCGTCGTTATGCACTGCTGAACAGGGTGCCTCTTCTTCCCCACGAGGAACTTCTC
TGCAAAGAAGCAATGCTTTTGCGTATGGATTTGGAACTTCAAAATCAAGCTTATTCCTCT
GCAGATTTGATCACCCACCATAGCATTAAAGTTTCTTTTGTAAATTTGATGCGGTTTCAA
CATCGTGCTAGGTGGTGCCTCATGAGATCAAAAGCATTTTCTGGTGTATCGTCATTTTCA
CACGGCACTATTCTTTGCAGCATATGCAAGCGTGACTGCTATGTAGCATATCTGAACTGC
AACTGTTACTCACATGCAATGTGCCTTCGCCATGATCCTAGGTCTCTTGATCTACCTTGT
GGAAGCAGTAGAACCCTTTGCTTAAGGGAAGATTTTTCGGACATTGAAACTGCAGCAAGG
AAGTTTGAGCTGGATGATGTTGTTTTGCATGAAATTGGGCAATATAGAGAAAGTGATGAC
TACAGTCTCCTTTTGAACATGTTTCCACGAGCTGAAGAGGAAGGCTATGTTCCATTTTGT
GAAATAAAGTTTGAATGGTCTGAGGAAACCTTGAAAACTGAGGACTGGGTTGAACAGGCC
TCCAATGCTTCTGCATCTAGTATTGGAATTGTGTCACGTGTTGGTTCTCCCATGGACCAA
AAAGATTGCCTTTCTGCTAATGTTGATGTACAGGAAAATGCTAACTCAAACTTAGGGAAT
AGTGTATCTGTCAGGCCTTCTAGAGACATTTCTGGATGTGAAAGTGAAAGATCAGTTTTT
TCACCTGGTGATGACTATTTAAAGGTTCATGAAAAAGTAGCTCATGTTTCAGATGCTAGA
ACTGTTGTAGATCAAGACAGTGATGAGTCTGATACAGAAATTTTCAGAGTGAAGAGACGT
TCTAGAACAGAACATGGGAGGAGGAGTACACATGATTCAATATCAGTTAATGTTGAGCAC
CAGGGTTACAAACGATTAAAGAAACATCAAACTGAAGGACGGCTTGGGCCATTATCTTCA
TCAGACTGTTCCATGGCTGATGATGCAACTCATAGTTACAATGGTAATTCAATCCATTCT
AAGGAAGCCTTGGATTATCCTTTAAGAGACAAATCGGCCAGAAGTGGTACAGTTCCCATC
TCTATTAAGTCCAAGAAAGGGGATAATGCATCGAGCAAGCAAAACGAGAATAAAAGAGAT
GAAAATTTCGACTATGGGTTGGGTAAGACTGTGGGGGAACCACCTCCGATAGAGATAGGG
CCAAAGAGGCTGAAAGTCAAGACCCTTCAATTTTTAAGTTTGGAGGAAGAATTGAATAGC
TCATAA

Peptide Sequence

PEP ID

XP_016433693.1
PEP Infomation

PREDICTED: lysine-specific demethylase JMJ706-like [Nicotiana tabacum]
Sequence

MSREAMLEFLKRKRLQRKKPESMNDSTYVSNTMSRSGGDALSSSASCGVRVHVNAGWGTS
LNRRDVFSKHKVAKFDTSNLDWTDKIPECPVYYPSKEEFEDPLVYLQKIAPEASKYGICK
IVSPIMASVPAGVVLMKEKAGFKFSTRVQPLRLAEWDTDDKVTFFMSGRNYTFRDFEKMA
NKLFTRRYCSAGCLPPAYMEKEFWHEIACGKTESVEYACDVDGSAFSSSPNDELGKCKWN
MKRFSCLPKATLRLLEKAIPGVTEPMLYIGMLFSMFAWHVEDHYLYSINYHHCGAAKTWY
GVPGHAALNFEKVVRQHVYNNDILNADGEDGAFDVLLQKTTLFPPNILSEHDVPVYKAVQ
KPGDFIVTFPRAYHAGFSHGFNCGEAVNFATGDWFPIGSVASRRYALLNRVPLLPHEELL
CKEAMLLRMDLELQNQAYSSADLITHHSIKVSFVNLMRFQHRARWCLMRSKAFSGVSSFS
HGTILCSICKRDCYVAYLNCNCYSHAMCLRHDPRSLDLPCGSSRTLCLREDFSDIETAAR
KFELDDVVLHEIGQYRESDDYSLLLNMFPRAEEEGYVPFCEIKFEWSEETLKTEDWVEQA
SNASASSIGIVSRVGSPMDQKDCLSANVDVQENANSNLGNSVSVRPSRDISGCESERSVF
SPGDDYLKVHEKVAHVSDARTVVDQDSDESDTEIFRVKRRSRTEHGRRSTHDSISVNVEH
QGYKRLKKHQTEGRLGPLSSSDCSMADDATHSYNGNSIHSKEALDYPLRDKSARSGTVPI
SIKSKKGDNASSKQNENKRDENFDYGLGKTVGEPPPIEIGPKRLKVKTLQFLSLEEELNS
S

Transcript Sequence

Gene sequence data has not been registered.